Update Details
Update (Version.2) statistics
  PubMed Ids Curated 50
   
  Number of Proteins 274 (181 New)
   
  Plant Ontology Terms 123 (15 New)
   
  Environmental Ontology Terms 83 (20 New)
     
  Trait Ontology Terms 134 (30 New)
     
  Gene Ontology Terms 59 (6 New)

S.No Gene Id          Gene Description  PubMed Ids
1  AAA27722   green-fluorescent protein
23007553
[Bang Seung Woon et al. Characterization of the stress-inducible OsNCED3 promoter in different transgenic rice organs and over three homozygous generations. Planta 2013:237]
2  AAA33886   alpha-amylase (EC 3.2.1.1)
24865690
[Zhang Dongping et al. OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.). PloS one 2014:9]
3  AAB30197   beta-glucuronidase
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
24951508
[Liang Chengzhen et al. OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice. Proceedings of the National Academy of Sciences of the United States of America 2014:111]
4  AAB65841   osRAD23
9225866
[Schultz T F et al. Characterization and expression of a rice RAD23 gene. Plant molecular biology 1997:34]
5  AAF23856   Sar8.2b protein [Nicotiana tabacum]
19381642
[Hu Xuebo et al. Ectopic expression of a rice protein phosphatase 2C gene OsBIPP2C2 in tobacco improves disease resistance. Plant cell reports 2009:28]
6  AAL34945   AC079037_18 Putative to o-methyltransferase ZRP4
24134674
[Byeon Yeong et al. Cellular localization and kinetics of the rice melatonin biosynthetic enzymes SNAT and ASMT. Journal of pineal research 2014:56]
7  AAL65399   3-ketoacyl-CoA thiolase, partial
24951508
[Liang Chengzhen et al. OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice. Proceedings of the National Academy of Sciences of the United States of America 2014:111]
8  AAN85707   putative DRE-binding protein 1B
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
9  AAQ23983   transcription factor RCBF3
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
10  ABD52007   stress-induced transcription factor NAC1
23415326
[ Saad Abu Sefyan I et al. A rice stress-responsive NAC gene enhances tolerance of transgenic wheat to drought and salt stresses. Plant science 2013: 203-204C ]
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
11  ABM90394   bZIP-type transcription factor ABI5 isoform 1
17604002
[Zou Meijuan et al. Characterization of alternative splicing products of bZIP transcription factors OsABI5. Biochemical and biophysical research communications 2007:360]
12  ABM90395   bZIP-type transcription factor ABI5 isoform 2
17604002
[Zou Meijuan et al. Characterization of alternative splicing products of bZIP transcription factors OsABI5. Biochemical and biophysical research communications 2007:360]
13  ACX37125   WRKY-type transcription factor 45-2
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
14  ADD62817   photosystem II protein D1 (chloroplast)
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
15  ADD62822   photosystem II CP43 chlorophyll apoprotein (chloroplast)
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
16  ADD62851   photosystem II CP47 chlorophyll apoprotein (chloroplast)
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
17  AK063334   cDNA clone:001-114-A05
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
18  AK065213   cDNA clone:J013002G03
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
19  AK069425   cDNA clone:J023019K03
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
20  AK070998   cDNA clone:J023078J23
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
21  AK107456   cDNA clone:002-128-C10
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
22  AK119713   cDNA clone:002-157-F03
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
23  AK120176   cDNA clone:J013033B20
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
24  AK120757   cDNA clone:J023007D09
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
25  AK120905   cDNA clone:J023031D09
24865690
[Zhang Dongping et al. OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.). PloS one 2014:9]
26  AK121952   cDNA clone:J033107K14
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
27  BAA04257   major intrinsic protein
7858235
[Liu Q et al. Isolation and expression analysis of two rice genes encoding the major intrinsic protein. Plant molecular biology 1994:26]
28  BAA05017   gamma-Tip
7858235
[Liu Q et al. Isolation and expression analysis of two rice genes encoding the major intrinsic protein. Plant molecular biology 1994:26]
29  BAA83740   TRAB1
10611387
[ Hobo T et al. A bZIP factor, TRAB1, interacts with VP1 and mediates abscisic acid-induced transcription. Proceedings of the National Academy of Sciences of the United States of America 1999:96]
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
30  BAB39765   zeaxanthin epoxidase
11244106
[Agrawal G K et al. Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene. Plant physiology 2001:125]
31  BAB85123   iron regulated metal transporter
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
32  BAD18963   OsFRO2 mRNA for ferric reductase
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
33  BAE91893   iron(III)-deoxymugineic acid transporter
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
34  BAG98602   unnamed protein product
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
35  CAA30017   unnamed protein product
19381642
[Hu Xuebo et al. Ectopic expression of a rice protein phosphatase 2C gene OsBIPP2C2 in tobacco improves disease resistance. Plant cell reports 2009:28]
36  CAA68765   RAB21 protein
2973410
[ Mundy J et al. Abscisic acid and water-stress induce the expression of a novel rice gene. The EMBO journal 1988:7]
37  GU120355   clone KCG218H02 alpha-amylase-like mRNA
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
38  LOC_Os01g04450   OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
39  LOC_Os01g08220   gibberellin 3-beta-dioxygenase 2-2, putative, expressed
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
40  LOC_Os01g09800   BTBA1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed
20459318
[Jiang Chang-Jie et al. Abscisic acid interacts antagonistically with salicylic acid signaling pathway in rice-Magnaporthe grisea interaction. Molecular plant-microbe interactions : MPMI 2010:23]
41  LOC_Os01g12160   OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
42  LOC_Os01g12490   flavin monooxygenase, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
43  LOC_Os01g22249   peroxidase precursor, putative, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
44  LOC_Os01g24710   jacalin-like lectin domain containing protein, expressed
20459318
[Jiang Chang-Jie et al. Abscisic acid interacts antagonistically with salicylic acid signaling pathway in rice-Magnaporthe grisea interaction. Molecular plant-microbe interactions : MPMI 2010:23]
45  LOC_Os01g25820   respiratory burst oxidase, putative, expressed
22869603
[Shi Ben et al. OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
46  LOC_Os01g26210   OsWAK6 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
47  LOC_Os01g31680   uncharacterized protein sll0194, putative, expressed
11244106
[Agrawal G K et al. Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene. Plant physiology 2001:125]
48  LOC_Os01g42630   C-5 cytosine-specific DNA methylase, putative, expressed
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
49  LOC_Os01g42900   ABC-2 type transporter domain containing protein, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
50  LOC_Os01g45760   YUC4, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
51  LOC_Os01g46970   transcription factor, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
52  LOC_Os01g49290   WD repeat-containing protein, putative, expressed
24865690
[Zhang Dongping et al. OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.). PloS one 2014:9]
53  LOC_Os01g50520   cytochrome P450 monooxygenase CYP711A12, putative
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
54  LOC_Os01g53200   flavin monooxygenase, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
55  LOC_Os01g53240   BURP domain containing protein, expressed
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
56  LOC_Os01g53294   respiratory burst oxidase protein B, putative, expressed
24865690
[Zhang Dongping et al. OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.). PloS one 2014:9]
57  LOC_Os01g54620   CESA4 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
58  LOC_Os01g55940   OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
59  LOC_Os01g57370   cyclic nucleotide-gated ion channel 2, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
60  LOC_Os01g57610   OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
61  LOC_Os01g59660   MYB family transcription factor, putative, expressed
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
62  LOC_Os01g59870   LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
63  LOC_Os01g61880   respiratory burst oxidase, putative, expressed
22869603
[Shi Ben et al. OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
64  LOC_Os01g61940   white-brown complex homolog protein, putative, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
65  LOC_Os01g62200   domain of unknown function DUF966 domain containing protein, expressed
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
66  LOC_Os01g64730   bZIP transcription factor domain containing protein, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
67  LOC_Os01g66100   gibberellin 20 oxidase 2, putative, expressed
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
68  LOC_Os01g66120   No apical meristem protein, putative, expressed
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
69  LOC_Os01g69920   histidine kinase, putative, expressed
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
70  LOC_Os01g72370   helix-loop-helix DNA-binding domain containing protein, expressed
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
71  LOC_Os01g74110   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
72  LOC_Os01g74410   MYB family transcription factor, putative, expressed
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
73  LOC_Os02g02120   OsWAK11 - OsWAK receptor-like protein kinase
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
74  LOC_Os02g02240   expressed protein
24237627
[Wang Lan et al. Characterization of a novel DUF1618 gene family in rice. Journal of integrative plant biology 2014:56]
75  LOC_Os02g02400   catalase isozyme A, putative, expressed
21398647
[Ye Nenghui et al. ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
76  LOC_Os02g09750   lycopene beta cyclase, chloroplast precursor, putative, expressed
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
77  LOC_Os02g15580   cyclic nucleotide-gated ion channel 1, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
78  LOC_Os02g30850   OsGrx_C8 - glutaredoxin subgroup III, expressed
23918184
[Sharma Raghvendra et al. Modified expression of an auxin-responsive rice CC-type glutaredoxin gene affects multiple abiotic stress responses. Planta 2013:238]
79  LOC_Os02g34600   CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
80  LOC_Os02g41680   phenylalanine ammonia-lyase, putative, expressed
24141028
[Fu Liwen et al. Overexpression of constitutively active OsCPK10 increases Arabidopsis resistance against Pseudomonas syringae pv. tomato and rice resistance against Magnaporthe grisea. Plant physiology and biochemistry : PPB / Société française de physiologie végétale 2013:73]
81  LOC_Os02g41710   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
82  LOC_Os02g42150   OsWAK14 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
83  LOC_Os02g42190   OsWAK16 - OsWAK receptor-like protein kinase
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
84  LOC_Os02g43330   homeobox associated leucine zipper, putative, expressed
25089296
[Huang Xi et al. OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.). TheScientificWorldJournal 2014:2014]
85  LOC_Os02g47470   cytochrome P450, putative, expressed
21398647
[Ye Nenghui et al. ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
86  LOC_Os02g47510   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
19208695
[Zhu Guohui et al. Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis. Plant & cell physiology 2009:50]
21398647
[Ye Nenghui et al. ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
87  LOC_Os02g52710   alpha-amylase precursor, putative, expressed
24865690
[Zhang Dongping et al. OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.). PloS one 2014:9]
88  LOC_Os02g52780   bZIP transcription factor, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
89  LOC_Os02g53340   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
90  LOC_Os02g54760   cyclic nucleotide-gated ion channel 14, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
91  LOC_Os02g56370   OsWAK20 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
92  LOC_Os02g56400   OsWAK22 - OsWAK receptor-like protein kinase
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
93  LOC_Os03g02010   DNA methyltransferase protein, putative, expressed
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
94  LOC_Os03g03910   catalase domain containing protein, expressed
21398647
[Ye Nenghui et al. ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
95  LOC_Os03g07100   LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
96  LOC_Os03g07250   cytochrome P450, putative, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
97  LOC_Os03g08170   protein kinase APK1B, chloroplast precursor, putative, expressed
25209982
[Ramegowda Venkategowda et al. Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and Grain Yield under Normal and Drought Stress Conditions. Plant physiology 2014:166]
98  LOC_Os03g08570   amine oxidase, flavin-containing, domain containing protein, expressed
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
99  LOC_Os03g09230   LTPL69 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
100  LOC_Os03g12370   HSF-type DNA-binding domain containing protein, expressed
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
101  LOC_Os03g12470   OsWAK25 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
102  LOC_Os03g12570   expressed protein
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
103  LOC_Os03g13390   oxidoreductase, aldo/keto reductase family protein, putative, expressed
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
104  LOC_Os03g14310   expressed protein
24237627
[Wang Lan et al. Characterization of a novel DUF1618 gene family in rice. Journal of integrative plant biology 2014:56]
105  LOC_Os03g15780   anthranilate synthase component I-1, chloroplast precursor, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
106  LOC_Os03g17350   white-brown complex homolog protein, putative, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
107  LOC_Os03g17700   CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
22693960
[Zhang Hong et al. The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice. Journal of integrative plant biology 2012:54]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
108  LOC_Os03g19420   nicotianamine synthase, putative, expressed
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
109  LOC_Os03g19427   nicotianamine synthase, putative, expressed
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
110  LOC_Os03g20760   LTPL66 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
111  LOC_Os03g21060   No apical meristem protein, putative, expressed
24951508
[Liang Chengzhen et al. OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice. Proceedings of the National Academy of Sciences of the United States of America 2014:111]
112  LOC_Os03g22810   copper/zinc superoxide dismutase, putative, expressed
22869603
[Shi Ben et al. OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5]
23777258
[Shi Ben et al. OsDMI3-mediated activation of OsMPK1 regulates the activities of antioxidant enzymes in abscisic acid signalling in rice. Plant, cell & environment 2014:37]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
113  LOC_Os03g26800   LTPL51 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
114  LOC_Os03g26820   LTPL52 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
115  LOC_Os03g29850   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
116  LOC_Os03g32230   ZOS3-12 - C2H2 zinc finger protein, expressed
22693960
[Zhang Hong et al. The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice. Journal of integrative plant biology 2012:54]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
117  LOC_Os03g44380   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
19208695
[Zhu Guohui et al. Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis. Plant & cell physiology 2009:50]
21398647
[Ye Nenghui et al. ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52]
22859682
[Song Shiyong et al. A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice. Journal of experimental botany 2012:63]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
25014258
[Endo Akira et al. Functional characterization of xanthoxin dehydrogenase in rice. Journal of plant physiology 2014:171]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
118  LOC_Os03g44440   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
119  LOC_Os03g46150   LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
120  LOC_Os03g50880   class I glutamine amidotransferase, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
121  LOC_Os03g53500   helicase conserved C-terminal domain containing protein, expressed
25184028
[Sahoo Ranjan Kumar et al. OsSUV3 transgenic rice maintains higher endogenous levels of plant hormones that mitigates adverse effects of salinity and sustains crop productivity. Rice (New York, N.Y.) 2014:7]
122  LOC_Os03g54200   expressed protein
24237627
[Wang Lan et al. Characterization of a novel DUF1618 gene family in rice. Journal of integrative plant biology 2014:56]
123  LOC_Os03g55100   cyclic nucleotide-gated ion channel 2, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
124  LOC_Os03g55320.1m   protein phosphatase 2C, putative, expressed
19381642
[Hu Xuebo et al. Ectopic expression of a rice protein phosphatase 2C gene OsBIPP2C2 in tobacco improves disease resistance. Plant cell reports 2009:28]
125  LOC_Os03g57450   CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
24141028
[Fu Liwen et al. Overexpression of constitutively active OsCPK10 increases Arabidopsis resistance against Pseudomonas syringae pv. tomato and rice resistance against Magnaporthe grisea. Plant physiology and biochemistry : PPB / Société française de physiologie végétale 2013:73]
126  LOC_Os03g57970   LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
127  LOC_Os03g57990   LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
128  LOC_Os03g58400   C-5 cytosine-specific DNA methylase, putative, expressed
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
129  LOC_Os03g58940   LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
130  LOC_Os03g59340   CESA2 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
131  LOC_Os03g59610   oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed
25014258
[Endo Akira et al. Functional characterization of xanthoxin dehydrogenase in rice. Journal of plant physiology 2014:171]
132  LOC_Os03g60080   NAC domain-containing protein 67, putative, expressed
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
133  LOC_Os03g60560   ZOS3-21 - C2H2 zinc finger protein, expressed
22693960
[Zhang Hong et al. The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice. Journal of integrative plant biology 2012:54]
134  LOC_Os03g61120   anthranilate synthase component I-1, chloroplast precursor, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
135  LOC_Os03g62090   CESA5 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
136  LOC_Os03g62430   OsWAK28 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
137  LOC_Os03g63970   gibberellin 20 oxidase 1, putative, expressed
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
138  LOC_Os04g03980   flavin monooxygenase, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
139  LOC_Os04g17660   rhodanese-like domain containing protein, putative, expressed
25209982
[Ramegowda Venkategowda et al. Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and Grain Yield under Normal and Drought Stress Conditions. Plant physiology 2014:166]
140  LOC_Os04g24220   OsWAK32 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
141  LOC_Os04g29680   OsWAK38 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
142  LOC_Os04g37619   zeaxanthin epoxidase, chloroplast precursor, putative, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
143  LOC_Os04g38840   LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
144  LOC_Os04g38950   class I glutamine amidotransferase, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
145  LOC_Os04g44150   gibberellin 2-beta-dioxygenase 7, putative, expressed
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
146  LOC_Os04g44924   short-chain dehydrogenase/reductase, putative, expressed
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
147  LOC_Os04g45000   short-chain dehydrogenase/reductase, putative, expressed
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
148  LOC_Os04g49980   late embryogenesis abundant group 1, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
149  LOC_Os04g51040   OsWAK50 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
150  LOC_Os04g51050   OsWAK53b - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
151  LOC_Os04g52310   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
152  LOC_Os04g55080   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
153  LOC_Os04g55760   OsWAK55 - OsWAK receptor-like protein kinase
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
154  LOC_Os04g57490   cysteine protease, putative, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
155  LOC_Os05g01380   polygalacturonase inhibitor precursor, putative, expressed
25488398
[Wang Rui et al. Functional analysis of OsPGIP1 in rice sheath blight resistance. Plant molecular biology 2014:]
156  LOC_Os05g02890   white-brown complex homolog protein 16, putative, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
157  LOC_Os05g04330   DNA methyltransferase protein, putative, expressed
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
158  LOC_Os05g04460   OsWAK56 - OsWAK receptor-like protein kinase
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
159  LOC_Os05g05180   OsGH3.6 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
160  LOC_Os05g07210   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
161  LOC_Os05g08370   CESA1 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
162  LOC_Os05g10940   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
163  LOC_Os05g13790   expressed protein
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
164  LOC_Os05g18660   OsFBDUF24 - F-box and DUF domain containing protein, expressed
24237627
[Wang Lan et al. Characterization of a novel DUF1618 gene family in rice. Journal of integrative plant biology 2014:56]
165  LOC_Os05g25770   OsWRKY45 - Superfamily of TFs having WRKY and zinc finger domains, expressed
20459318
[Jiang Chang-Jie et al. Abscisic acid interacts antagonistically with salicylic acid signaling pathway in rice-Magnaporthe grisea interaction. Molecular plant-microbe interactions : MPMI 2010:23]
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
166  LOC_Os05g25850   superoxide dismutase, mitochondrial precursor, putative, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
167  LOC_Os05g31910   white-brown complex homolog protein 16, putative, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
168  LOC_Os05g38150   amino acid kinase, putative, expressed
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
169  LOC_Os05g39540   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
170  LOC_Os05g39560   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
171  LOC_Os05g39770   aminotransferase, putative, expressed
24951508
[Liang Chengzhen et al. OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice. Proceedings of the National Academy of Sciences of the United States of America 2014:111]
172  LOC_Os05g40260   acetyltransferase, GNAT family, putative, expressed
24134674
[Byeon Yeong et al. Cellular localization and kinetics of the rice melatonin biosynthetic enzymes SNAT and ASMT. Journal of pineal research 2014:56]
173  LOC_Os05g41030   LTPL67 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
174  LOC_Os05g41090   CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
22869603
[Shi Ben et al. OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5]
23777258
[Shi Ben et al. OsDMI3-mediated activation of OsMPK1 regulates the activities of antioxidant enzymes in abscisic acid signalling in rice. Plant, cell & environment 2014:37]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
175  LOC_Os05g42150   OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
176  LOC_Os05g42250   cyclic nucleotide-gated ion channel 2, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
177  LOC_Os05g45240   flavin monooxygenase, putative
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
178  LOC_Os05g45450   DUF584 domain containing protein, putative, expressed
25209982
[Ramegowda Venkategowda et al. Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and Grain Yield under Normal and Drought Stress Conditions. Plant physiology 2014:166]
179  LOC_Os05g46480   late embryogenesis abundant protein, group 3, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
180  LOC_Os05g50890   OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
181  LOC_Os06g02520   interacting protein of DMI3, putative, expressed
23777258
[Shi Ben et al. OsDMI3-mediated activation of OsMPK1 regulates the activities of antioxidant enzymes in abscisic acid signalling in rice. Plant, cell & environment 2014:37]
182  LOC_Os06g06090   CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
22693960
[Zhang Hong et al. The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice. Journal of integrative plant biology 2012:54]
23777258
[Shi Ben et al. OsDMI3-mediated activation of OsMPK1 regulates the activities of antioxidant enzymes in abscisic acid signalling in rice. Plant, cell & environment 2014:37]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
183  LOC_Os06g08850   cyclic nucleotide-gated ion channel 14, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
184  LOC_Os06g09450   sucrose synthase, putative, expressed
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
185  LOC_Os06g10580   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
186  LOC_Os06g10880   bZIP transcription factor, putative, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
187  LOC_Os06g30440   OsGH3.7 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
188  LOC_Os06g30730   ABC-2 type transporter domain containing protein, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
189  LOC_Os06g33570   cyclic nucleotide-gated ion channel 1, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
190  LOC_Os06g33610   cyclic nucleotide-gated ion channel 1, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
191  LOC_Os06g37010   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
192  LOC_Os06g39970   CESA11 - cellulose synthase
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
193  LOC_Os06g47200   LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
194  LOC_Os06g51150   catalase isozyme B, putative, expressed
21398647
[Ye Nenghui et al. ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52]
22869603
[Shi Ben et al. OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5]
23777258
[Shi Ben et al. OsDMI3-mediated activation of OsMPK1 regulates the activities of antioxidant enzymes in abscisic acid signalling in rice. Plant, cell & environment 2014:37]
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
195  LOC_Os07g01340   gibberellin 2-beta-dioxygenase 7, putative, expressed
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
196  LOC_Os07g05940   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
19208695
[Zhu Guohui et al. Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis. Plant & cell physiology 2009:50]
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
23007553
[Bang Seung Woon et al. Characterization of the stress-inducible OsNCED3 promoter in different transgenic rice organs and over three homozygous generations. Planta 2013:237]
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
25014258
[Endo Akira et al. Functional characterization of xanthoxin dehydrogenase in rice. Journal of plant physiology 2014:171]
197  LOC_Os07g07050   aldehyde oxidase, putative, expressed
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
198  LOC_Os07g07420   gibberellin 20 oxidase 1-B, putative, expressed
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
199  LOC_Os07g07790   LTPL75 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
200  LOC_Os07g07860   LTPL76 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
201  LOC_Os07g07870   LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
202  LOC_Os07g07930   LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
203  LOC_Os07g08500   C-5 cytosine-specific DNA methylase, putative, expressed
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
204  LOC_Os07g09970   LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
205  LOC_Os07g10770   CESA8 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
206  LOC_Os07g12890   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
207  LOC_Os07g12900   cadmium/zinc-transporting ATPase, putative
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
208  LOC_Os07g14850   CESA6 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
209  LOC_Os07g18154   aldehyde oxidase 4, putative, expressed
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
210  LOC_Os07g18158   aldehyde oxidase, putative, expressed
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
211  LOC_Os07g24190   CESA3 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
212  LOC_Os07g25540   flavin monooxygenase, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
213  LOC_Os07g34520   isocitrate lyase, putative, expressed
25209982
[Ramegowda Venkategowda et al. Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and Grain Yield under Normal and Drought Stress Conditions. Plant physiology 2014:166]
214  LOC_Os07g38860   OsGH3.10 - Probable indole-3-acetic acid-amido synthetase
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
215  LOC_Os07g38890   OsGH3.9 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
216  LOC_Os07g40290   OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
217  LOC_Os07g43290   LTPL56 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
218  LOC_Os07g47490   OsGH3.11 - Probable indole-3-acetic acid-amido synthetase, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
219  LOC_Os07g48640   short-chain dehydrogenase/reductase, putative, expressed
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
220  LOC_Os07g49400   OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed
24912543
[Wen Feng et al. OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:]
221  LOC_Os08g05520   myb-like DNA-binding domain containing protein, putative, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
222  LOC_Os08g10630   metal cation transporter, putative, expressed
25151617
[Sasaki Akimasa et al. Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice. Journal of experimental botany 2014:65]
223  LOC_Os08g32930   expressed protein
25209982
[Ramegowda Venkategowda et al. Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and Grain Yield under Normal and Drought Stress Conditions. Plant physiology 2014:166]
224  LOC_Os08g36790   bZIP transcription factor, putative, expressed
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
225  LOC_Os08g36860   cytochrome P450, putative, expressed
19208695
[Zhu Guohui et al. Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis. Plant & cell physiology 2009:50]
21398647
[Ye Nenghui et al. ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52]
22859682
[Song Shiyong et al. A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice. Journal of experimental botany 2012:63]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
226  LOC_Os08g36910   alpha-amylase precursor, putative, expressed
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
227  LOC_Os08g39180   OsWAK73 - OsWAK receptor-like protein kinase
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
228  LOC_Os08g39210   OsWAK74 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
229  LOC_Os08g39220   OsWAK75 - OsWAK receptor-like protein kinase
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
230  LOC_Os08g39240   OsWAK76 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
231  LOC_Os08g42040   LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
25407280
[Ma Tengfei et al. Identification, characterization, and transcription analysis of xylogen-like arabinogalactan proteins in rice (Oryza sativa L.). BMC plant biology 2014:14]
232  LOC_Os08g43290   LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
233  LOC_Os09g03939   white-brown complex homolog protein 11, putative, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
234  LOC_Os09g17560   O-methyltransferase, putative, expressed
24134674
[Byeon Yeong et al. Cellular localization and kinetics of the rice melatonin biosynthetic enzymes SNAT and ASMT. Journal of pineal research 2014:56]
235  LOC_Os09g23640   ABC-2 type transporter domain containing protein
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
236  LOC_Os09g25490   CESA9 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
237  LOC_Os09g26950   cytochrome P450 monooxygenase CYP92A1, putative
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
238  LOC_Os09g27620   PHD-finger domain containing protein, putative
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
239  LOC_Os09g28310   bZIP transcription factor, putative, expressed
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
240  LOC_Os09g28390   cytochrome P450, putative, expressed
19208695
[Zhu Guohui et al. Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis. Plant & cell physiology 2009:50]
22859682
[Song Shiyong et al. A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice. Journal of experimental botany 2012:63]
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
25273891
[Ye Nenghui et al. Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:]
241  LOC_Os09g30454   OsWAK87 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
242  LOC_Os09g36200   senescence-inducible chloroplast stay-green protein 1, putative, expressed
24951508
[Liang Chengzhen et al. OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice. Proceedings of the National Academy of Sciences of the United States of America 2014:111]
243  LOC_Os09g38580   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
244  LOC_Os09g38910   OsWAK92 - OsWAK receptor-like protein kinase, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
245  LOC_Os10g01570   C-5 cytosine-specific DNA methylase, putative, expressed
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
246  LOC_Os10g02360   OsWAK98 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed
25443845
[de Oliveira Luiz Felipe Valter et al. The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229]
247  LOC_Os10g02880   O-methyltransferase, putative, expressed
24134674
[Byeon Yeong et al. Cellular localization and kinetics of the rice melatonin biosynthetic enzymes SNAT and ASMT. Journal of pineal research 2014:56]
248  LOC_Os10g03850   OsFBX352 - F-box domain containing protein, expressed
22859682
[Song Shiyong et al. A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice. Journal of experimental botany 2012:63]
249  LOC_Os10g05720   LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
23686450
[Guo Changkui et al. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82]
250  LOC_Os10g08014   white-brown complex homolog protein 11, putative, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
251  LOC_Os10g25030   red chlorophyll catabolite reductase, putative, expressed
24951508
[Liang Chengzhen et al. OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice. Proceedings of the National Academy of Sciences of the United States of America 2014:111]
252  LOC_Os10g30850   zinc finger, RING-type, putative, expressed
25209982
[Ramegowda Venkategowda et al. Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and Grain Yield under Normal and Drought Stress Conditions. Plant physiology 2014:166]
253  LOC_Os10g32980   CESA7 - cellulose synthase, expressed
24906444
[Yang Chunhua et al. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14]
254  LOC_Os11g01810   DNA methyltransferase protein, putative
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
255  LOC_Os11g03370   no apical meristem protein, putative, expressed
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
256  LOC_Os11g04020   major facilitator superfamily antiporter, putative, expressed
25394797
[Pereira Margarida P et al. Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C]
257  LOC_Os11g07600   ABC-2 type transporter domain containing protein, expressed
22996334
[ Matsuda Shuichi et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Molecular genetics and genomics 2012:287]
258  LOC_Os11g08340   OsGH3.12 - Probable indole-3-acetic acid-amido synthetase
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
259  LOC_Os11g26760   dehydrin, putative, expressed
24247850
[Luo Chengke et al. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33]
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
260  LOC_Os11g26780   dehydrin, putative, expressed
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
261  LOC_Os11g26790   dehydrin, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
25014258
[Endo Akira et al. Functional characterization of xanthoxin dehydrogenase in rice. Journal of plant physiology 2014:171]
262  LOC_Os11g32510   OsGH3-13 - Auxin-responsive GH3 gene family member, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
263  LOC_Os11g33120   respiratory burst oxidase, putative, expressed
22869603
[Shi Ben et al. OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5]
264  LOC_Os11g36440   amine oxidase, flavin-containing, domain containing protein, expressed
18208525
[Fang Jun et al. Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. The Plant journal : for cell and molecular biology 2008:54]
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
265  LOC_Os12g01800   DNA cytosine methyltransferase Zmet3, putative
25061741
[Ahmad F et al. Comprehensive gene expression analysis of the DNA (cytosine-5) methyltransferase family in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
266  LOC_Os12g06570   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
267  LOC_Os12g24800   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
19208695
[Zhu Guohui et al. Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis. Plant & cell physiology 2009:50]
22859682
[Song Shiyong et al. A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice. Journal of experimental botany 2012:63]
24634194
[Chen Q F et al. Expression of the key genes involved in ABA biosynthesis in rice implanted by ion beam. Applied biochemistry and biotechnology 2014:173]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
268  LOC_Os12g28260   cyclic nucleotide-gated ion channel, putative, expressed
25280591
[Nawaz Zarqa et al. Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses. BMC genomics 2014:15]
269  LOC_Os12g32750   flavin monooxygenase, putative, expressed
23846670
[Du Hao et al. Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83]
270  LOC_Os12g39710   expressed protein
24237627
[Wang Lan et al. Characterization of a novel DUF1618 gene family in rice. Journal of integrative plant biology 2014:56]
271  LOC_Os12g39970   expressed protein
24237627
[Wang Lan et al. Characterization of a novel DUF1618 gene family in rice. Journal of integrative plant biology 2014:56]
272  LOC_Os12g42280   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
21725029
[Tao Zeng et al. OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62]
24667379
[Xiong Haiyan et al. Overexpression of OsMYB48-1, a novel MYB-related transcription factor, enhances drought and salinity tolerance in rice. PloS one 2014:9]
24976122
[Liu Yang et al. Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41]
25014258
[Endo Akira et al. Functional characterization of xanthoxin dehydrogenase in rice. Journal of plant physiology 2014:171]
273  NP_001050944   Os03g0688300
24884869
[Wei Shuya et al. A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14]
274  NP_001066954   Os12g0541300
24865690
[Zhang Dongping et al. OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.). PloS one 2014:9]

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India