S.No |
Gene Id |
Gene Description |
PubMed Ids |
|
1 |
A2YH60 |
Cyclin-B2-2 |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
 |
2 |
AAA27722 |
green-fluorescent protein |
24105034 |
[Liu Taibo et al. Oryza sativa polyamine oxidase 1 back-converts tetraamines, spermine and thermospermine, to spermidine. Plant cell reports 2014:33] |
|
|
3 |
AAB30197 |
beta-glucuronidase |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
24834920 |
[Wang Chuang et al. Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa. Journal of experimental botany 2014:65] |
24938613 |
[Li L et al. Cloning and characterization of the drought-resistance OsRCI2-5 gene in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13] |
25041515 |
[Shiono Katsuhiro et al. RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). The Plant journal : for cell and molecular biology 2014:80] |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
4 |
AAP75620 |
allene oxide synthase |
24840865 |
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127] |
|
 |
5 |
AAR19268 |
ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
6 |
AAS13688 |
zinc finger protein LSD1 |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
 |
7 |
AAV49505 |
adventitious rootless1 |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
 |
8 |
ABG29109 |
myosin heavy chain 1 |
24464125 |
[Liang Wei-Hong et al. Isolation and characterization of OsMY1, a putative partner of OsRac5 from Oryza sativa L. Molecular biology reports 2014:41] |
|
 |
9 |
ACE98543 |
heme oxygenase 1 |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
|
 |
10 |
AK066285 |
cDNA clone:J013068N08 |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
 |
11 |
AK066737 |
cDNA clone:J013079G10 |
24840865 |
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127] |
|
 |
12 |
AK071221 |
cDNA clone:J023088C02 |
25150410 |
[Tang Wei et al. RNAi-directed downregulation of betaine aldehyde dehydrogenase 1 (OsBADH1) results in decreased stress tolerance and increased oxidative markers without affecting glycine betaine biosynthesis in rice (Oryza sativa). Plant molecular biology 2014:86] |
|
 |
13 |
AT1G07890 |
APX1,ascorbate peroxidase 1 |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
|
|
14 |
AT1G20630 |
CAT1,catalase 1 |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
|
 |
15 |
AT3G09640 |
APX2,ascorbate peroxidase 2 |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
|
|
16 |
AT4G35090 |
CAT2,catalase 2 |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
|
|
17 |
BAA37131 |
iron-superoxide dismutase |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
|
 |
18 |
BAP28224 |
Brown planthopper resistance protein |
25076167 |
[Tamura Yasumori et al. Map-based cloning and characterization of a brown planthopper resistance gene BPH26 from Oryza sativa L. ssp. indica cultivar ADR52. Scientific reports 2014:4] |
|
 |
19 |
LOC_Os01g01610 |
IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
20 |
LOC_Os01g02120 |
osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
 |
21 |
LOC_Os01g03650 |
sufB/sufD domain containing protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
22 |
LOC_Os01g03750 |
expressed protein |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
 |
23 |
LOC_Os01g07950 |
OsGrx_S15.2 - glutaredoxin subgroup II, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
24 |
LOC_Os01g08220 |
gibberellin 3-beta-dioxygenase 2-2, putative, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
|
25 |
LOC_Os01g08320 |
OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
26 |
LOC_Os01g13030 |
OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
27 |
LOC_Os01g18584 |
OsWRKY9 - Superfamily of TFs having WRKY and zinc finger domains, expressed |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
 |
28 |
LOC_Os01g21560 |
esterase/lipase/thioesterase family protein, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
29 |
LOC_Os01g34060 |
MYB family transcription factor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
30 |
LOC_Os01g38359 |
peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
 |
31 |
LOC_Os01g38670 |
transporter family protein, putative, expressed |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
|
 |
32 |
LOC_Os01g38680 |
transporter family protein, putative, expressed |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
|
 |
33 |
LOC_Os01g41710 |
chlorophyll A-B binding protein, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
34 |
LOC_Os01g43440 |
TOO MANY MOUTHS precursor, putative |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
35 |
LOC_Os01g43550 |
OsWRKY12 - Superfamily of TFs having WRKY and zinc finger domains, expressed |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
|
36 |
LOC_Os01g43560 |
hypothetical protein |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
 |
37 |
LOC_Os01g43650 |
OsWRKY11 - Superfamily of TFs having WRKY and zinc finger domains, expressed |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
|
38 |
LOC_Os01g45760 |
YUC4, putative, expressed |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
|
39 |
LOC_Os01g46970 |
transcription factor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
40 |
LOC_Os01g47340 |
iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
41 |
LOC_Os01g51320 |
peroxisomal N-acetyl-spermine/spermidine oxidase precursor, putative, expressed |
24105034 |
[Liu Taibo et al. Oryza sativa polyamine oxidase 1 back-converts tetraamines, spermine and thermospermine, to spermidine. Plant cell reports 2014:33] |
|
 |
42 |
LOC_Os01g52170 |
expressed protein |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
43 |
LOC_Os01g53250 |
NADPH reductase, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
44 |
LOC_Os01g53260 |
OsWRKY23 - Superfamily of TFs having WRKY and zinc finger domains, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
|
45 |
LOC_Os01g54540 |
ribosomal protein L13, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
46 |
LOC_Os01g54620 |
CESA4 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
47 |
LOC_Os01g54990 |
auxin response factor, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
 |
48 |
LOC_Os01g57460 |
frataxin, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
49 |
LOC_Os01g60730 |
RING-H2 finger protein, putative, expressed |
24158250 |
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127] |
|
 |
50 |
LOC_Os01g60740 |
LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
24158250 |
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127] |
|
 |
51 |
LOC_Os01g61400 |
sufB/sufD domain containing protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
|
52 |
LOC_Os01g61940 |
white-brown complex homolog protein, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
|
53 |
LOC_Os01g62760 |
protein phosphatase 2C, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
54 |
LOC_Os01g63770 |
transmembrane amino acid transporter protein, putative, expressed |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
|
 |
55 |
LOC_Os01g66100 |
gibberellin 20 oxidase 2, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
|
56 |
LOC_Os01g68370 |
B3 DNA binding domain containing protein, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
57 |
LOC_Os01g69210 |
mannosyl-oligosaccharide glucosidase, putative, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
 |
58 |
LOC_Os01g71310 |
cytokinin dehydrogenase precursor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
59 |
LOC_Os01g72370 |
helix-loop-helix DNA-binding domain containing protein, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
60 |
LOC_Os02g02170 |
transporter, major facilitator family, putative, expressed |
25393516 |
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81] |
|
 |
61 |
LOC_Os02g02190 |
transporter, major facilitator family, putative, expressed |
25393516 |
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81] |
|
 |
62 |
LOC_Os02g02400 |
catalase isozyme A, putative, expressed |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
63 |
LOC_Os02g09750 |
lycopene beta cyclase, chloroplast precursor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
64 |
LOC_Os02g12890 |
cytochrome P450, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
 |
65 |
LOC_Os02g15760 |
helix-loop-helix DNA-binding domain containing protein |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
66 |
LOC_Os02g17700 |
pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
67 |
LOC_Os02g17780 |
ent-kaurene synthase, chloroplast precursor, putative, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
|
68 |
LOC_Os02g20360 |
tyrosine aminotransferase, putative, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
69 |
LOC_Os02g34600 |
CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
70 |
LOC_Os02g43410 |
transposon protein, putative, unclassified, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
25393516 |
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81] |
|
|
71 |
LOC_Os02g44642 |
STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
72 |
LOC_Os02g47470 |
cytochrome P450, putative, expressed |
17205969 |
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48] |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
73 |
LOC_Os02g50960 |
auxin efflux carrier component, putative, expressed |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
|
74 |
LOC_Os02g52230 |
coronatine-insensitive protein 1, putative, expressed |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
|
 |
75 |
LOC_Os02g52710 |
alpha-amylase precursor, putative, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
76 |
LOC_Os02g52780 |
bZIP transcription factor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
77 |
LOC_Os02g52990 |
OsSAUR12 - Auxin-responsive SAUR gene family member, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
 |
78 |
LOC_Os02g53420 |
DnaK family protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
|
79 |
LOC_Os02g55300 |
CAF1 family ribonuclease containing protein, putative, expressed |
24805883 |
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85] |
|
 |
80 |
LOC_Os02g56120 |
OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
81 |
LOC_Os03g02260 |
DnaK family protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
|
82 |
LOC_Os03g03910 |
catalase domain containing protein, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
83 |
LOC_Os03g04630 |
cytochrome P450 protein, putative |
25800365 |
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88] |
|
 |
84 |
LOC_Os03g04650 |
cytochrome P450 protein, putative, expressed |
25800365 |
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88] |
|
 |
85 |
LOC_Os03g04660 |
cytochrome P450 86A1, putative, expressed |
25800365 |
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88] |
|
 |
86 |
LOC_Os03g04680 |
cytochrome P450, putative, expressed |
25800365 |
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88] |
|
|
87 |
LOC_Os03g04690 |
expressed protein |
25800365 |
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88] |
|
 |
88 |
LOC_Os03g04950 |
OsSub26 - Putative Subtilisin homologue, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
89 |
LOC_Os03g06654 |
flavin monooxygenase, putative, expressed |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
|
90 |
LOC_Os03g08900 |
MATE efflux family protein, putative, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
 |
91 |
LOC_Os03g10850 |
FAD-linked sulfhydryl oxidase ALR, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
92 |
LOC_Os03g11960 |
copper/zinc superoxide dismutase, putative, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
 |
93 |
LOC_Os03g12030 |
3-ketoacyl-CoA synthase, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
|
94 |
LOC_Os03g12500 |
cytochrome P450, putative, expressed |
24840865 |
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127] |
|
|
95 |
LOC_Os03g16170 |
protein phosphatase 2C, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
96 |
LOC_Os03g17350 |
white-brown complex homolog protein, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
25041515 |
[Shiono Katsuhiro et al. RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). The Plant journal : for cell and molecular biology 2014:80] |
|
|
97 |
LOC_Os03g17690 |
OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
98 |
LOC_Os03g17790 |
OsRCI2-5 - Putative low temperature and salt responsive protein, expressed |
24938613 |
[Li L et al. Cloning and characterization of the drought-resistance OsRCI2-5 gene in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13] |
|
 |
99 |
LOC_Os03g18820 |
glycosyltransferase, putative, expressed |
24834920 |
[Wang Chuang et al. Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa. Journal of experimental botany 2014:65] |
|
 |
100 |
LOC_Os03g19420 |
nicotianamine synthase, putative, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
25393516 |
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81] |
|
|
101 |
LOC_Os03g19427 |
nicotianamine synthase, putative, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
25393516 |
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81] |
|
|
102 |
LOC_Os03g20010 |
nifU, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
103 |
LOC_Os03g21490 |
ABC transporter, ATP-binding protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
104 |
LOC_Os03g22700 |
cyclin-dependent kinase C-2, putative, expressed |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
|
 |
105 |
LOC_Os03g22780 |
DVR, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
106 |
LOC_Os03g22810 |
copper/zinc superoxide dismutase, putative, expressed |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
107 |
LOC_Os03g32314 |
allene oxide cyclase 4, chloroplast precursor, putative, expressed |
24840865 |
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127] |
|
|
108 |
LOC_Os03g40270 |
alpha-1,4-glucan-protein synthase, putative, expressed |
25261533 |
[Sumiyoshi Minako et al. UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa). Plant & cell physiology 2015:56] |
|
 |
109 |
LOC_Os03g40500 |
transposon protein, putative, CACTA, En/Spm sub-class |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
 |
110 |
LOC_Os03g42880 |
nucleotide-binding protein-like, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
111 |
LOC_Os03g43400 |
OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
|
112 |
LOC_Os03g44380 |
9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed |
17205969 |
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48] |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
113 |
LOC_Os03g46454 |
metal cation transporter, putative, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
 |
114 |
LOC_Os03g46470 |
metal cation transporter, putative, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
115 |
LOC_Os03g53500 |
helicase conserved C-terminal domain containing protein, expressed |
23808500 |
[Tuteja Narendra et al. OsSUV3 dual helicase functions in salinity stress tolerance by maintaining photosynthesis and antioxidant machinery in rice (Oryza sativa L. cv. IR64). The Plant journal : for cell and molecular biology 2013:76] |
24398379 |
[Sahoo Ranjan Kumar et al. OsSUV3 functions in cadmium and zinc stress tolerance in rice (Oryza sativa L. cv IR64). Plant signaling & behavior 2014:9] |
|
|
116 |
LOC_Os03g53750 |
nuclear prelamin A recognition factor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
117 |
LOC_Os03g57120 |
ferredoxin--NADP reductase, chloroplast precursor, putative, expressed |
25426937 |
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9] |
|
 |
118 |
LOC_Os03g59340 |
CESA2 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
119 |
LOC_Os03g62090 |
CESA5 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
120 |
LOC_Os03g63420 |
OsGrx_S14 - glutaredoxin subgroup II, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
121 |
LOC_Os04g16820 |
DNA-directed RNA polymerase subunit beta, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
122 |
LOC_Os04g33720 |
glycosyl hydrolases, putative, expressed |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
|
 |
123 |
LOC_Os04g37619 |
zeaxanthin epoxidase, chloroplast precursor, putative, expressed |
17205969 |
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48] |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
|
124 |
LOC_Os04g38410 |
chlorophyll A-B binding protein, putative, expressed |
25426937 |
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9] |
|
 |
125 |
LOC_Os04g38570 |
multidrug resistance protein, putative, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
 |
126 |
LOC_Os04g39020 |
aldehyde dehydrogenase, putative, expressed |
25150410 |
[Tang Wei et al. RNAi-directed downregulation of betaine aldehyde dehydrogenase 1 (OsBADH1) results in decreased stress tolerance and increased oxidative markers without affecting glycine betaine biosynthesis in rice (Oryza sativa). Plant molecular biology 2014:86] |
|
|
127 |
LOC_Os04g40880 |
nucleotide-binding protein 1, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
128 |
LOC_Os04g44150 |
gibberellin 2-beta-dioxygenase 7, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
|
129 |
LOC_Os04g46960 |
glutathione peroxidase domain containing protein, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
 |
130 |
LOC_Os04g47240 |
STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
131 |
LOC_Os04g47250 |
cytochrome P450, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
|
132 |
LOC_Os04g48850 |
aminotransferase, classes I and II, domain containing protein, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
133 |
LOC_Os04g50864 |
expressed protein |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
134 |
LOC_Os04g52090 |
AP2 domain containing protein, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
|
135 |
LOC_Os04g52230 |
ent-kaurene synthase, chloroplast precursor, putative, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
|
136 |
LOC_Os04g56520 |
alpha-1,4-glucan-protein synthase, putative, expressed |
25261533 |
[Sumiyoshi Minako et al. UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa). Plant & cell physiology 2015:56] |
|
 |
137 |
LOC_Os04g57810 |
GA18008-PA, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
138 |
LOC_Os04g58810 |
CAF1 family ribonuclease containing protein, putative, expressed |
24805883 |
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85] |
|
 |
139 |
LOC_Os05g05680 |
1-aminocyclopropane-1-carboxylate oxidase, putative, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
140 |
LOC_Os05g06330 |
nifU, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
141 |
LOC_Os05g08370 |
CESA1 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
142 |
LOC_Os05g09500 |
hexokinase, putative, expressed |
25951042 |
[Kim Hyun-Bi et al. Role of rice cytosolic hexokinase OsHXK7 in sugar signaling and metabolism. Journal of integrative plant biology 2015:] |
|
 |
143 |
LOC_Os05g12260 |
CAPIP1, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
144 |
LOC_Os05g20100 |
glycerol-3-phosphate acyltransferase, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
145 |
LOC_Os05g25850 |
superoxide dismutase, mitochondrial precursor, putative, expressed |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
146 |
LOC_Os05g28200 |
prenyltransferase, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
147 |
LOC_Os05g33730 |
gibberellin receptor GID1L2, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
148 |
LOC_Os05g34290 |
glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
 |
149 |
LOC_Os05g38290 |
protein phosphatase 2C, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
150 |
LOC_Os05g38350 |
glycerol-3-phosphate acyltransferase 8, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
151 |
LOC_Os05g39310 |
thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
152 |
LOC_Os05g40384 |
cytochrome P450, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
 |
153 |
LOC_Os05g45420 |
CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
154 |
LOC_Os05g46480 |
late embryogenesis abundant protein, group 3, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
155 |
LOC_Os05g48590 |
OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
|
|
156 |
LOC_Os05g48630 |
expressed protein |
25426937 |
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9] |
|
 |
157 |
LOC_Os05g49300 |
iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
158 |
LOC_Os05g50900 |
helix-loop-helix DNA-binding protein, putative |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
159 |
LOC_Os05g51820 |
helix-loop-helix DNA-binding protein, putative |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
160 |
LOC_Os06g02019 |
cytochrome P450, putative, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
|
161 |
LOC_Os06g02180 |
CSLD2 - cellulose synthase-like family D, expressed |
25522878 |
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457] |
|
 |
162 |
LOC_Os06g03770 |
ABC transporter, ATP-binding protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
163 |
LOC_Os06g03990 |
aminotransferase, classes I and II, domain containing protein, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
164 |
LOC_Os06g04380 |
aminomethyltransferase, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
165 |
LOC_Os06g05110 |
superoxide dismutase, chloroplast, putative, expressed |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
166 |
LOC_Os06g05400 |
IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
167 |
LOC_Os06g06300 |
osFTL3 FT-Like3 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
24158250 |
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127] |
|
|
168 |
LOC_Os06g06320 |
osFTL2 FT-Like2 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
24158250 |
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127] |
|
|
169 |
LOC_Os06g06360 |
WRKY DNA-binding domain containing protein, expressed |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
|
170 |
LOC_Os06g07040 |
OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
171 |
LOC_Os06g08340 |
AP2 domain containing protein |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
 |
172 |
LOC_Os06g09450 |
sucrose synthase, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
173 |
LOC_Os06g11130 |
gibberellin receptor GID1L2, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
 |
174 |
LOC_Os06g11290 |
12-oxophytodienoate reductase, putative, expressed |
24840865 |
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127] |
|
|
175 |
LOC_Os06g16350 |
peroxidase precursor, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
176 |
LOC_Os06g22980 |
CSLD5 - cellulose synthase-like family D, expressed |
25522878 |
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457] |
|
 |
177 |
LOC_Os06g33450 |
helix-loop-helix DNA-binding domain containing protein, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
178 |
LOC_Os06g39590 |
OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
|
|
179 |
LOC_Os06g39970 |
CESA11 - cellulose synthase |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
180 |
LOC_Os06g44230 |
DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
|
181 |
LOC_Os06g47940 |
nifU, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
182 |
LOC_Os06g51150 |
catalase isozyme B, putative, expressed |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
183 |
LOC_Os06g51220 |
HMG1/2, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
184 |
LOC_Os07g01930 |
2Fe-2S iron-sulfur cluster binding domain containing protein, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
185 |
LOC_Os07g02060 |
OsWRKY29 - Superfamily of TFs having WRKY and zinc finger domains, expressed |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
|
186 |
LOC_Os07g05360 |
photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
 |
187 |
LOC_Os07g05940 |
9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed |
17205969 |
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48] |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
188 |
LOC_Os07g06130 |
ethylene-insensitive protein, putative, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
189 |
LOC_Os07g06880 |
gibberellin receptor GID1L2, putative, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
 |
190 |
LOC_Os07g07790 |
LTPL75 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
|
191 |
LOC_Os07g08050 |
expressed protein |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
192 |
LOC_Os07g08420 |
bZIP transcription factor domain containing protein, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
 |
193 |
LOC_Os07g10490 |
zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
194 |
LOC_Os07g10770 |
CESA8 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
195 |
LOC_Os07g14830 |
WD domain, G-beta repeat domain containing protein, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
196 |
LOC_Os07g14850 |
CESA6 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
197 |
LOC_Os07g15770 |
CCT motif family protein |
24158250 |
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127] |
|
 |
198 |
LOC_Os07g24190 |
CESA3 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
199 |
LOC_Os07g26720 |
OsRR7 type-A response regulator, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
200 |
LOC_Os07g27670 |
WRKY DNA-binding domain containing protein, expressed |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
 |
201 |
LOC_Os07g27790 |
glutamate--cysteine ligase, chloroplast precursor, putative, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
 |
202 |
LOC_Os07g36740 |
CSLF4 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
 |
203 |
LOC_Os07g37030 |
cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed |
25426937 |
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9] |
|
 |
204 |
LOC_Os07g41360 |
alpha-1,4-glucan-protein synthase, putative, expressed |
25261533 |
[Sumiyoshi Minako et al. UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa). Plant & cell physiology 2015:56] |
|
 |
205 |
LOC_Os07g42940 |
CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
206 |
LOC_Os07g46990 |
copper/zinc superoxide dismutase, putative, expressed |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
|
 |
207 |
LOC_Os07g49400 |
OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed |
24905845 |
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38] |
25048895 |
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112] |
|
|
208 |
LOC_Os08g02630 |
photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed |
25426937 |
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9] |
|
 |
209 |
LOC_Os08g07740 |
histone-like transcription factor and archaeal histone, putative, expressed |
24158250 |
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127] |
|
 |
210 |
LOC_Os08g09800 |
transposon protein, putative, unclassified |
24189206 |
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171] |
|
 |
211 |
LOC_Os08g10310 |
SHR5-receptor-like kinase, putative, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
212 |
LOC_Os08g14070 |
LYR motif containing protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
213 |
LOC_Os08g25710 |
CSLD3 - cellulose synthase-like family D, expressed |
25522878 |
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457] |
|
 |
214 |
LOC_Os08g27840 |
phosphoenolpyruvate carboxylase, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
215 |
LOC_Os08g28230 |
IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
216 |
LOC_Os08g33200 |
1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
217 |
LOC_Os08g34170 |
CAF1 family ribonuclease containing protein, putative, expressed |
24805883 |
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85] |
|
 |
218 |
LOC_Os08g35740 |
12-oxophytodienoate reductase, putative, expressed |
24840865 |
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127] |
|
|
219 |
LOC_Os08g36480 |
nitrate reductase, putative, expressed |
25393516 |
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81] |
|
 |
220 |
LOC_Os08g36500 |
nitrate reductase, putative, expressed |
25393516 |
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81] |
|
 |
221 |
LOC_Os08g36860 |
cytochrome P450, putative, expressed |
17205969 |
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48] |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
222 |
LOC_Os08g36900 |
alpha-amylase precursor, putative, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
223 |
LOC_Os08g36910 |
alpha-amylase precursor, putative, expressed |
25353370 |
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
25951042 |
[Kim Hyun-Bi et al. Role of rice cytosolic hexokinase OsHXK7 in sugar signaling and metabolism. Journal of integrative plant biology 2015:] |
|
|
224 |
LOC_Os08g39850 |
lipoxygenase, chloroplast precursor, putative, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
 |
225 |
LOC_Os09g09790 |
Fe-S metabolism associated domain containing protein, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
226 |
LOC_Os09g11460 |
AP2 domain containing protein, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
227 |
LOC_Os09g11480 |
AP2 domain containing protein, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
228 |
LOC_Os09g16910 |
cysteine desulfurase 1, mitochondrial precursor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
229 |
LOC_Os09g17740 |
chlorophyll A-B binding protein, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
|
230 |
LOC_Os09g24590 |
expressed protein |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
 |
231 |
LOC_Os09g24990 |
CAF1 family ribonuclease containing protein, putative, expressed |
24805883 |
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85] |
|
 |
232 |
LOC_Os09g26650 |
2Fe-2S iron-sulfur cluster binding domain containing protein, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
233 |
LOC_Os09g26810 |
chlorophyll A-B binding protein, putative, expressed |
25426937 |
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9] |
|
 |
234 |
LOC_Os09g27750 |
1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
|
235 |
LOC_Os09g28390 |
cytochrome P450, putative, expressed |
17205969 |
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48] |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
236 |
LOC_Os09g28400 |
alpha-amylase precursor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
 |
237 |
LOC_Os09g28420 |
alpha-amylase precursor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
238 |
LOC_Os09g29100 |
cyclin, putative, expressed |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
|
|
239 |
LOC_Os09g31486 |
DnaK family protein, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
|
240 |
LOC_Os09g37330 |
OsSAUR39 - Auxin-responsive SAUR gene family member, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
241 |
LOC_Os09g38320 |
phytoene synthase, chloroplast precursor, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
242 |
LOC_Os10g07010 |
3-ketoacyl-CoA synthase, putative, expressed |
24913626 |
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65] |
|
 |
243 |
LOC_Os10g18820 |
dirigent, putative, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
 |
244 |
LOC_Os10g21192 |
photosystem Q, putative |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
245 |
LOC_Os10g21328 |
DNA-directed RNA polymerase subunit alpha, putative |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
246 |
LOC_Os10g22310 |
glutathione S-transferase GST 26, putative, expressed |
24985886 |
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23] |
|
|
247 |
LOC_Os10g32600 |
MYB family transcription factor, putative |
24158250 |
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127] |
|
|
248 |
LOC_Os10g32980 |
CESA7 - cellulose synthase, expressed |
24597623 |
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:] |
|
|
249 |
LOC_Os10g35840 |
shikimate/quinate 5-dehydrogenase, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
250 |
LOC_Os10g36703 |
CPuORF40 - conserved peptide uORF-containing transcript, expressed |
20838584 |
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6] |
|
 |
251 |
LOC_Os10g38229 |
photosystem I P700 chlorophyll a apoprotein A1, putative |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
252 |
LOC_Os10g41780 |
chlorophyllide a oxygenase, chloroplast precursor, putative, expressed |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
253 |
LOC_Os10g42750 |
CSLD1 - cellulose synthase-like family D, expressed |
25522878 |
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457] |
|
 |
254 |
LOC_Os11g02240 |
CAMK_KIN1/SNF1/Nim1_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
255 |
LOC_Os11g05740 |
B3 DNA binding domain containing protein, expressed |
25330236 |
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10] |
|
 |
256 |
LOC_Os11g07916 |
nifU, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
257 |
LOC_Os11g10480 |
dehydrogenase, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
258 |
LOC_Os11g10510 |
dehydrogenase, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
259 |
LOC_Os11g26790 |
dehydrin, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
260 |
LOC_Os11g32100 |
inducer of CBF expression 1, putative, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
261 |
LOC_Os11g32110 |
auxin response factor, putative, expressed |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
|
262 |
LOC_Os11g36440 |
amine oxidase, flavin-containing, domain containing protein, expressed |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
263 |
LOC_Os12g07650 |
OsGrx_S16 - glutaredoxin subgroup II, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
264 |
LOC_Os12g18900 |
aminotransferase, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
265 |
LOC_Os12g19304 |
Fe-S metabolism associated domain containing protein, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
266 |
LOC_Os12g27070 |
heat shock protein DnaJ, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
267 |
LOC_Os12g30030 |
IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed |
24028141 |
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37] |
|
 |
268 |
LOC_Os12g36890 |
CSLD4 - cellulose synthase-like family D, expressed |
25522878 |
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457] |
|
 |
269 |
LOC_Os12g39180 |
natural resistance-associated macrophage protein, putative, expressed |
24798203 |
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79] |
|
|
270 |
LOC_Os12g39830 |
cyclin, putative, expressed |
25311360 |
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:] |
|
 |
271 |
LOC_Os12g42280 |
9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed |
17205969 |
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48] |
17693452 |
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48] |
25418692 |
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:] |
|
|
272 |
NP_039359 |
ribosomal protein S12 (plastid) |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
 |
273 |
NP_039391 |
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit |
24132771 |
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84] |
|
|
274 |
Q6EP31 |
Rac-like GTP-binding protein 5 |
24464125 |
[Liang Wei-Hong et al. Isolation and characterization of OsMY1, a putative partner of OsRac5 from Oryza sativa L. Molecular biology reports 2014:41] |
|
 |
275 |
Q8W0F1 |
WUSCHEL-related homeobox 9 |
25256506 |
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113] |
|
 |