Update Details
Update (Version.3) statistics
  PubMed Ids Curated 35
   
  Number of Proteins 275 (155 New)
   
  Plant Ontology Terms 142 (42 New)
   
  Environmental Ontology Terms 88 (28 New)
     
  Trait Ontology Terms 209 (87 New)
     
  Gene Ontology Terms 62 (20 New)

S.No Gene Id          Gene Description  PubMed Ids
1  A2YH60   Cyclin-B2-2
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]
2  AAA27722   green-fluorescent protein
24105034
[Liu Taibo et al. Oryza sativa polyamine oxidase 1 back-converts tetraamines, spermine and thermospermine, to spermidine. Plant cell reports 2014:33]
3  AAB30197   beta-glucuronidase
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
24834920
[Wang Chuang et al. Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa. Journal of experimental botany 2014:65]
24938613
[Li L et al. Cloning and characterization of the drought-resistance OsRCI2-5 gene in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
25041515
[Shiono Katsuhiro et al. RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). The Plant journal : for cell and molecular biology 2014:80]
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
4  AAP75620   allene oxide synthase
24840865
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127]
5  AAR19268   ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
6  AAS13688   zinc finger protein LSD1
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
7  AAV49505   adventitious rootless1
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]
8  ABG29109   myosin heavy chain 1
24464125
[Liang Wei-Hong et al. Isolation and characterization of OsMY1, a putative partner of OsRac5 from Oryza sativa L. Molecular biology reports 2014:41]
9  ACE98543   heme oxygenase 1
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
10  AK066285   cDNA clone:J013068N08
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
11  AK066737   cDNA clone:J013079G10
24840865
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127]
12  AK071221   cDNA clone:J023088C02
25150410
[Tang Wei et al. RNAi-directed downregulation of betaine aldehyde dehydrogenase 1 (OsBADH1) results in decreased stress tolerance and increased oxidative markers without affecting glycine betaine biosynthesis in rice (Oryza sativa). Plant molecular biology 2014:86]
13  AT1G07890   APX1,ascorbate peroxidase 1
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
14  AT1G20630   CAT1,catalase 1
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
15  AT3G09640   APX2,ascorbate peroxidase 2
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
16  AT4G35090   CAT2,catalase 2
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
17  BAA37131   iron-superoxide dismutase
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
18  BAP28224   Brown planthopper resistance protein
25076167
[Tamura Yasumori et al. Map-based cloning and characterization of a brown planthopper resistance gene BPH26 from Oryza sativa L. ssp. indica cultivar ADR52. Scientific reports 2014:4]
19  LOC_Os01g01610   IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
20  LOC_Os01g02120   osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
21  LOC_Os01g03650   sufB/sufD domain containing protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
22  LOC_Os01g03750   expressed protein
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
23  LOC_Os01g07950   OsGrx_S15.2 - glutaredoxin subgroup II, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
24  LOC_Os01g08220   gibberellin 3-beta-dioxygenase 2-2, putative, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
25  LOC_Os01g08320   OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
26  LOC_Os01g13030   OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
27  LOC_Os01g18584   OsWRKY9 - Superfamily of TFs having WRKY and zinc finger domains, expressed
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
28  LOC_Os01g21560   esterase/lipase/thioesterase family protein, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
29  LOC_Os01g34060   MYB family transcription factor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
30  LOC_Os01g38359   peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
31  LOC_Os01g38670   transporter family protein, putative, expressed
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
32  LOC_Os01g38680   transporter family protein, putative, expressed
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
33  LOC_Os01g41710   chlorophyll A-B binding protein, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
34  LOC_Os01g43440   TOO MANY MOUTHS precursor, putative
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
35  LOC_Os01g43550   OsWRKY12 - Superfamily of TFs having WRKY and zinc finger domains, expressed
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
36  LOC_Os01g43560   hypothetical protein
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
37  LOC_Os01g43650   OsWRKY11 - Superfamily of TFs having WRKY and zinc finger domains, expressed
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
38  LOC_Os01g45760   YUC4, putative, expressed
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]
39  LOC_Os01g46970   transcription factor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
40  LOC_Os01g47340   iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
41  LOC_Os01g51320   peroxisomal N-acetyl-spermine/spermidine oxidase precursor, putative, expressed
24105034
[Liu Taibo et al. Oryza sativa polyamine oxidase 1 back-converts tetraamines, spermine and thermospermine, to spermidine. Plant cell reports 2014:33]
42  LOC_Os01g52170   expressed protein
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
43  LOC_Os01g53250   NADPH reductase, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
44  LOC_Os01g53260   OsWRKY23 - Superfamily of TFs having WRKY and zinc finger domains, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
45  LOC_Os01g54540   ribosomal protein L13, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
46  LOC_Os01g54620   CESA4 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
47  LOC_Os01g54990   auxin response factor, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
48  LOC_Os01g57460   frataxin, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
49  LOC_Os01g60730   RING-H2 finger protein, putative, expressed
24158250
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127]
50  LOC_Os01g60740   LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
24158250
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127]
51  LOC_Os01g61400   sufB/sufD domain containing protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
52  LOC_Os01g61940   white-brown complex homolog protein, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
53  LOC_Os01g62760   protein phosphatase 2C, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
54  LOC_Os01g63770   transmembrane amino acid transporter protein, putative, expressed
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
55  LOC_Os01g66100   gibberellin 20 oxidase 2, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
56  LOC_Os01g68370   B3 DNA binding domain containing protein, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
57  LOC_Os01g69210   mannosyl-oligosaccharide glucosidase, putative, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
58  LOC_Os01g71310   cytokinin dehydrogenase precursor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
59  LOC_Os01g72370   helix-loop-helix DNA-binding domain containing protein, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
60  LOC_Os02g02170   transporter, major facilitator family, putative, expressed
25393516
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81]
61  LOC_Os02g02190   transporter, major facilitator family, putative, expressed
25393516
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81]
62  LOC_Os02g02400   catalase isozyme A, putative, expressed
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
63  LOC_Os02g09750   lycopene beta cyclase, chloroplast precursor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
64  LOC_Os02g12890   cytochrome P450, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
65  LOC_Os02g15760   helix-loop-helix DNA-binding domain containing protein
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
66  LOC_Os02g17700   pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
67  LOC_Os02g17780   ent-kaurene synthase, chloroplast precursor, putative, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
68  LOC_Os02g20360   tyrosine aminotransferase, putative, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
69  LOC_Os02g34600   CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
70  LOC_Os02g43410   transposon protein, putative, unclassified, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
25393516
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81]
71  LOC_Os02g44642   STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
72  LOC_Os02g47470   cytochrome P450, putative, expressed
17205969
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48]
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
73  LOC_Os02g50960   auxin efflux carrier component, putative, expressed
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]
74  LOC_Os02g52230   coronatine-insensitive protein 1, putative, expressed
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
75  LOC_Os02g52710   alpha-amylase precursor, putative, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
76  LOC_Os02g52780   bZIP transcription factor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
77  LOC_Os02g52990   OsSAUR12 - Auxin-responsive SAUR gene family member, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
78  LOC_Os02g53420   DnaK family protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
79  LOC_Os02g55300   CAF1 family ribonuclease containing protein, putative, expressed
24805883
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85]
80  LOC_Os02g56120   OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
81  LOC_Os03g02260   DnaK family protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
82  LOC_Os03g03910   catalase domain containing protein, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
83  LOC_Os03g04630   cytochrome P450 protein, putative
25800365
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88]
84  LOC_Os03g04650   cytochrome P450 protein, putative, expressed
25800365
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88]
85  LOC_Os03g04660   cytochrome P450 86A1, putative, expressed
25800365
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88]
86  LOC_Os03g04680   cytochrome P450, putative, expressed
25800365
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88]
87  LOC_Os03g04690   expressed protein
25800365
[Tamiru Muluneh et al. A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant molecular biology 2015:88]
88  LOC_Os03g04950   OsSub26 - Putative Subtilisin homologue, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
89  LOC_Os03g06654   flavin monooxygenase, putative, expressed
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]
90  LOC_Os03g08900   MATE efflux family protein, putative, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
91  LOC_Os03g10850   FAD-linked sulfhydryl oxidase ALR, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
92  LOC_Os03g11960   copper/zinc superoxide dismutase, putative, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
93  LOC_Os03g12030   3-ketoacyl-CoA synthase, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
94  LOC_Os03g12500   cytochrome P450, putative, expressed
24840865
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127]
95  LOC_Os03g16170   protein phosphatase 2C, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
96  LOC_Os03g17350   white-brown complex homolog protein, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
25041515
[Shiono Katsuhiro et al. RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). The Plant journal : for cell and molecular biology 2014:80]
97  LOC_Os03g17690   OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
98  LOC_Os03g17790   OsRCI2-5 - Putative low temperature and salt responsive protein, expressed
24938613
[Li L et al. Cloning and characterization of the drought-resistance OsRCI2-5 gene in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13]
99  LOC_Os03g18820   glycosyltransferase, putative, expressed
24834920
[Wang Chuang et al. Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa. Journal of experimental botany 2014:65]
100  LOC_Os03g19420   nicotianamine synthase, putative, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
25393516
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81]
101  LOC_Os03g19427   nicotianamine synthase, putative, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
25393516
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81]
102  LOC_Os03g20010   nifU, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
103  LOC_Os03g21490   ABC transporter, ATP-binding protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
104  LOC_Os03g22700   cyclin-dependent kinase C-2, putative, expressed
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
105  LOC_Os03g22780   DVR, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
106  LOC_Os03g22810   copper/zinc superoxide dismutase, putative, expressed
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
107  LOC_Os03g32314   allene oxide cyclase 4, chloroplast precursor, putative, expressed
24840865
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127]
108  LOC_Os03g40270   alpha-1,4-glucan-protein synthase, putative, expressed
25261533
[Sumiyoshi Minako et al. UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa). Plant & cell physiology 2015:56]
109  LOC_Os03g40500   transposon protein, putative, CACTA, En/Spm sub-class
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
110  LOC_Os03g42880   nucleotide-binding protein-like, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
111  LOC_Os03g43400   OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]
112  LOC_Os03g44380   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
17205969
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48]
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
113  LOC_Os03g46454   metal cation transporter, putative, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
114  LOC_Os03g46470   metal cation transporter, putative, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
115  LOC_Os03g53500   helicase conserved C-terminal domain containing protein, expressed
23808500
[Tuteja Narendra et al. OsSUV3 dual helicase functions in salinity stress tolerance by maintaining photosynthesis and antioxidant machinery in rice (Oryza sativa L. cv. IR64). The Plant journal : for cell and molecular biology 2013:76]
24398379
[Sahoo Ranjan Kumar et al. OsSUV3 functions in cadmium and zinc stress tolerance in rice (Oryza sativa L. cv IR64). Plant signaling & behavior 2014:9]
116  LOC_Os03g53750   nuclear prelamin A recognition factor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
117  LOC_Os03g57120   ferredoxin--NADP reductase, chloroplast precursor, putative, expressed
25426937
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9]
118  LOC_Os03g59340   CESA2 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
119  LOC_Os03g62090   CESA5 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
120  LOC_Os03g63420   OsGrx_S14 - glutaredoxin subgroup II, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
121  LOC_Os04g16820   DNA-directed RNA polymerase subunit beta, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
122  LOC_Os04g33720   glycosyl hydrolases, putative, expressed
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
123  LOC_Os04g37619   zeaxanthin epoxidase, chloroplast precursor, putative, expressed
17205969
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48]
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
124  LOC_Os04g38410   chlorophyll A-B binding protein, putative, expressed
25426937
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9]
125  LOC_Os04g38570   multidrug resistance protein, putative, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
126  LOC_Os04g39020   aldehyde dehydrogenase, putative, expressed
25150410
[Tang Wei et al. RNAi-directed downregulation of betaine aldehyde dehydrogenase 1 (OsBADH1) results in decreased stress tolerance and increased oxidative markers without affecting glycine betaine biosynthesis in rice (Oryza sativa). Plant molecular biology 2014:86]
127  LOC_Os04g40880   nucleotide-binding protein 1, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
128  LOC_Os04g44150   gibberellin 2-beta-dioxygenase 7, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
129  LOC_Os04g46960   glutathione peroxidase domain containing protein, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
130  LOC_Os04g47240   STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
131  LOC_Os04g47250   cytochrome P450, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
132  LOC_Os04g48850   aminotransferase, classes I and II, domain containing protein, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
133  LOC_Os04g50864   expressed protein
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
134  LOC_Os04g52090   AP2 domain containing protein, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
135  LOC_Os04g52230   ent-kaurene synthase, chloroplast precursor, putative, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
136  LOC_Os04g56520   alpha-1,4-glucan-protein synthase, putative, expressed
25261533
[Sumiyoshi Minako et al. UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa). Plant & cell physiology 2015:56]
137  LOC_Os04g57810   GA18008-PA, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
138  LOC_Os04g58810   CAF1 family ribonuclease containing protein, putative, expressed
24805883
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85]
139  LOC_Os05g05680   1-aminocyclopropane-1-carboxylate oxidase, putative, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
140  LOC_Os05g06330   nifU, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
141  LOC_Os05g08370   CESA1 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
142  LOC_Os05g09500   hexokinase, putative, expressed
25951042
[Kim Hyun-Bi et al. Role of rice cytosolic hexokinase OsHXK7 in sugar signaling and metabolism. Journal of integrative plant biology 2015:]
143  LOC_Os05g12260   CAPIP1, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
144  LOC_Os05g20100   glycerol-3-phosphate acyltransferase, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
145  LOC_Os05g25850   superoxide dismutase, mitochondrial precursor, putative, expressed
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
146  LOC_Os05g28200   prenyltransferase, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
147  LOC_Os05g33730   gibberellin receptor GID1L2, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
148  LOC_Os05g34290   glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
149  LOC_Os05g38290   protein phosphatase 2C, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
150  LOC_Os05g38350   glycerol-3-phosphate acyltransferase 8, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
151  LOC_Os05g39310   thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
152  LOC_Os05g40384   cytochrome P450, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
153  LOC_Os05g45420   CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
154  LOC_Os05g46480   late embryogenesis abundant protein, group 3, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
155  LOC_Os05g48590   OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
156  LOC_Os05g48630   expressed protein
25426937
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9]
157  LOC_Os05g49300   iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
158  LOC_Os05g50900   helix-loop-helix DNA-binding protein, putative
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
159  LOC_Os05g51820   helix-loop-helix DNA-binding protein, putative
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
160  LOC_Os06g02019   cytochrome P450, putative, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
161  LOC_Os06g02180   CSLD2 - cellulose synthase-like family D, expressed
25522878
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457]
162  LOC_Os06g03770   ABC transporter, ATP-binding protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
163  LOC_Os06g03990   aminotransferase, classes I and II, domain containing protein, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
164  LOC_Os06g04380   aminomethyltransferase, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
165  LOC_Os06g05110   superoxide dismutase, chloroplast, putative, expressed
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
166  LOC_Os06g05400   IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
167  LOC_Os06g06300   osFTL3 FT-Like3 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
24158250
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127]
168  LOC_Os06g06320   osFTL2 FT-Like2 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
24158250
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127]
169  LOC_Os06g06360   WRKY DNA-binding domain containing protein, expressed
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
170  LOC_Os06g07040   OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
171  LOC_Os06g08340   AP2 domain containing protein
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
172  LOC_Os06g09450   sucrose synthase, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
173  LOC_Os06g11130   gibberellin receptor GID1L2, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
174  LOC_Os06g11290   12-oxophytodienoate reductase, putative, expressed
24840865
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127]
175  LOC_Os06g16350   peroxidase precursor, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
176  LOC_Os06g22980   CSLD5 - cellulose synthase-like family D, expressed
25522878
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457]
177  LOC_Os06g33450   helix-loop-helix DNA-binding domain containing protein, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
178  LOC_Os06g39590   OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
179  LOC_Os06g39970   CESA11 - cellulose synthase
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
180  LOC_Os06g44230   DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
181  LOC_Os06g47940   nifU, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
182  LOC_Os06g51150   catalase isozyme B, putative, expressed
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
183  LOC_Os06g51220   HMG1/2, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
184  LOC_Os07g01930   2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
185  LOC_Os07g02060   OsWRKY29 - Superfamily of TFs having WRKY and zinc finger domains, expressed
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
186  LOC_Os07g05360   photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
187  LOC_Os07g05940   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
17205969
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48]
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
188  LOC_Os07g06130   ethylene-insensitive protein, putative, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
189  LOC_Os07g06880   gibberellin receptor GID1L2, putative, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
190  LOC_Os07g07790   LTPL75 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
191  LOC_Os07g08050   expressed protein
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
192  LOC_Os07g08420   bZIP transcription factor domain containing protein, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
193  LOC_Os07g10490   zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
194  LOC_Os07g10770   CESA8 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
195  LOC_Os07g14830   WD domain, G-beta repeat domain containing protein, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
196  LOC_Os07g14850   CESA6 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
197  LOC_Os07g15770   CCT motif family protein
24158250
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127]
198  LOC_Os07g24190   CESA3 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
199  LOC_Os07g26720   OsRR7 type-A response regulator, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
200  LOC_Os07g27670   WRKY DNA-binding domain containing protein, expressed
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
201  LOC_Os07g27790   glutamate--cysteine ligase, chloroplast precursor, putative, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
202  LOC_Os07g36740   CSLF4 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
203  LOC_Os07g37030   cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed
25426937
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9]
204  LOC_Os07g41360   alpha-1,4-glucan-protein synthase, putative, expressed
25261533
[Sumiyoshi Minako et al. UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa). Plant & cell physiology 2015:56]
205  LOC_Os07g42940   CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
206  LOC_Os07g46990   copper/zinc superoxide dismutase, putative, expressed
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
207  LOC_Os07g49400   OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed
24905845
[Xie Yanjie et al. Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence in Oryza sativa. Plant, cell & environment 2015:38]
25048895
[Nair Prakash M Gopalakrishnan et al. Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112]
208  LOC_Os08g02630   photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed
25426937
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9]
209  LOC_Os08g07740   histone-like transcription factor and archaeal histone, putative, expressed
24158250
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127]
210  LOC_Os08g09800   transposon protein, putative, unclassified
24189206
[Nuruzzaman Mohammed et al. Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation. Journal of plant physiology 2014:171]
211  LOC_Os08g10310   SHR5-receptor-like kinase, putative, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
212  LOC_Os08g14070   LYR motif containing protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
213  LOC_Os08g25710   CSLD3 - cellulose synthase-like family D, expressed
25522878
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457]
214  LOC_Os08g27840   phosphoenolpyruvate carboxylase, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
215  LOC_Os08g28230   IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
216  LOC_Os08g33200   1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
217  LOC_Os08g34170   CAF1 family ribonuclease containing protein, putative, expressed
24805883
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85]
218  LOC_Os08g35740   12-oxophytodienoate reductase, putative, expressed
24840865
[Kim Yoon-Ha et al. Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127]
219  LOC_Os08g36480   nitrate reductase, putative, expressed
25393516
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81]
220  LOC_Os08g36500   nitrate reductase, putative, expressed
25393516
[Araki Ryoichi et al. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81]
221  LOC_Os08g36860   cytochrome P450, putative, expressed
17205969
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48]
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
222  LOC_Os08g36900   alpha-amylase precursor, putative, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
223  LOC_Os08g36910   alpha-amylase precursor, putative, expressed
25353370
[Wu Jiahe et al. OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
25951042
[Kim Hyun-Bi et al. Role of rice cytosolic hexokinase OsHXK7 in sugar signaling and metabolism. Journal of integrative plant biology 2015:]
224  LOC_Os08g39850   lipoxygenase, chloroplast precursor, putative, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
225  LOC_Os09g09790   Fe-S metabolism associated domain containing protein, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
226  LOC_Os09g11460   AP2 domain containing protein, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
227  LOC_Os09g11480   AP2 domain containing protein, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
228  LOC_Os09g16910   cysteine desulfurase 1, mitochondrial precursor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
229  LOC_Os09g17740   chlorophyll A-B binding protein, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
230  LOC_Os09g24590   expressed protein
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
231  LOC_Os09g24990   CAF1 family ribonuclease containing protein, putative, expressed
24805883
[Chou Wei-Lun et al. Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa. Plant molecular biology 2014:85]
232  LOC_Os09g26650   2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
233  LOC_Os09g26810   chlorophyll A-B binding protein, putative, expressed
25426937
[Song Alin et al. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress. PloS one 2014:9]
234  LOC_Os09g27750   1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
235  LOC_Os09g28390   cytochrome P450, putative, expressed
17205969
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48]
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
236  LOC_Os09g28400   alpha-amylase precursor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
237  LOC_Os09g28420   alpha-amylase precursor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
238  LOC_Os09g29100   cyclin, putative, expressed
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
239  LOC_Os09g31486   DnaK family protein, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
240  LOC_Os09g37330   OsSAUR39 - Auxin-responsive SAUR gene family member, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
241  LOC_Os09g38320   phytoene synthase, chloroplast precursor, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
242  LOC_Os10g07010   3-ketoacyl-CoA synthase, putative, expressed
24913626
[Shiono Katsuhiro et al. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65]
243  LOC_Os10g18820   dirigent, putative, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
244  LOC_Os10g21192   photosystem Q, putative
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
245  LOC_Os10g21328   DNA-directed RNA polymerase subunit alpha, putative
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
246  LOC_Os10g22310   glutathione S-transferase GST 26, putative, expressed
24985886
[Kumar Amit et al. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23]
247  LOC_Os10g32600   MYB family transcription factor, putative
24158250
[Li Riqing et al. Characterization and genetic mapping of a Photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2014:127]
248  LOC_Os10g32980   CESA7 - cellulose synthase, expressed
24597623
[Wang Suikang et al. OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:]
249  LOC_Os10g35840   shikimate/quinate 5-dehydrogenase, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
250  LOC_Os10g36703   CPuORF40 - conserved peptide uORF-containing transcript, expressed
20838584
[Yaish Mahmoud W et al. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6]
251  LOC_Os10g38229   photosystem I P700 chlorophyll a apoprotein A1, putative
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
252  LOC_Os10g41780   chlorophyllide a oxygenase, chloroplast precursor, putative, expressed
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
253  LOC_Os10g42750   CSLD1 - cellulose synthase-like family D, expressed
25522878
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457]
254  LOC_Os11g02240   CAMK_KIN1/SNF1/Nim1_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
255  LOC_Os11g05740   B3 DNA binding domain containing protein, expressed
25330236
[Ma Biao et al. Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10]
256  LOC_Os11g07916   nifU, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
257  LOC_Os11g10480   dehydrogenase, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
258  LOC_Os11g10510   dehydrogenase, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
259  LOC_Os11g26790   dehydrin, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
260  LOC_Os11g32100   inducer of CBF expression 1, putative, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
261  LOC_Os11g32110   auxin response factor, putative, expressed
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]
262  LOC_Os11g36440   amine oxidase, flavin-containing, domain containing protein, expressed
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
263  LOC_Os12g07650   OsGrx_S16 - glutaredoxin subgroup II, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
264  LOC_Os12g18900   aminotransferase, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
265  LOC_Os12g19304   Fe-S metabolism associated domain containing protein, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
266  LOC_Os12g27070   heat shock protein DnaJ, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
267  LOC_Os12g30030   IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed
24028141
[Liang Xuejiao et al. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37]
268  LOC_Os12g36890   CSLD4 - cellulose synthase-like family D, expressed
25522878
[Ding Zhengquan et al. DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.). Biochemical and biophysical research communications 2015:457]
269  LOC_Os12g39180   natural resistance-associated macrophage protein, putative, expressed
24798203
[Xu Yanxia et al. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79]
270  LOC_Os12g39830   cyclin, putative, expressed
25311360
[Zhao Heming et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:]
271  LOC_Os12g42280   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
17205969
[Saika Hiroaki et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Plant & cell physiology 2007:48]
17693452
[Oliver Sandra N et al. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant & cell physiology 2007:48]
25418692
[Du Hao et al. GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:]
272  NP_039359   ribosomal protein S12 (plastid)
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
273  NP_039391   ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
24132771
[Song Jian et al. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84]
274  Q6EP31   Rac-like GTP-binding protein 5
24464125
[Liang Wei-Hong et al. Isolation and characterization of OsMY1, a putative partner of OsRac5 from Oryza sativa L. Molecular biology reports 2014:41]
275  Q8W0F1   WUSCHEL-related homeobox 9
25256506
[Zhang Yunhong et al. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling. Carbohydrate polymers 2014:113]

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India