Monthly submission of phase II/PLN clones (Cumulative)

An overview of the sequencing status of chromosome 11 (57.3-116.2 cM)

(Last updated: 16/08/2005)

S.No.

Map
Position
Acc.No. BAC/PAC Marker Size(bp) Seq. Status Annotation
1 57.3 cM AC137752 OSJNBa0041C22 R120, R1891 161172 PLN

RiceGAAS

2   AC135864 OSJNBb0071K13 FPC 176150 PLN

RiceGAAS

3   AC135242 OSJNBa0070D14 FPC 175083 PLN

RiceGAAS

4   AC137113 OSJNBb0006N14 FPC 155730 PLN

RiceGAAS

5  

AC132003

OSJNBb0091D07 FPC 144652 PLN

RiceGAAS

6   AC137586 OSJNBb0054A16 FPC 164605 PLN

RiceGAAS

7   AC135512 OSJNBb0057M06 FPC 147788 PLN

RiceGAAS

8 57.6 cM AC136786 OSJNBa0027P09 C754 171862 PLN

RiceGAAS

9   AC135398 OSJNBa0079N13 FPC 140946 PLN

RiceGAAS

10   AC136843 OSJNBa0094M06 FPC 135406 PLN

RiceGAAS

11  

AC109646

OSJNBa0017K22 FPC 176399 PLN

RiceGAAS

12   AC150654 OSJNBa0094L06 FPC 189328 PLN

RiceGAAS

13  

AC114012

OSJNBa0079H11 FPC 143925 PLN

RiceGAAS

14   AC114011 OSJNBa0078F20 C602 151042 PLN

RiceGAAS

15 64.2 cM AC131343 OSJNBa0057E15 R728 149035 PLN

RiceGAAS

16   AC137745 OSJNBb0041J18 FPC 129523 PLN

RiceGAAS

17   AC148759 OSJNBa0030K09 FPC 143355 PLN
18   AC136378 OSJNBb0047D03 C137 126165 PLN

RiceGAAS

19 64.8 cM AC136787 OSJNBa0052B22 E20817 156725 PLN

RiceGAAS

20   AC135121 OSJNBb0089M05 FPC 131308 PLN

RiceGAAS

21  

AC133608

OSJNBb0085G12 FPC  121472 PLN

RiceGAAS

22   AC135569 OSJNBb0018F17 G62 104291 PLN

RiceGAAS

23   AC145306 OSJNBa0010E20(PCR) FPC 713 PLN  
24 68.4 cM

AC124151

OSJNBb0019E05 G257 129021 PLN

RiceGAAS

25   AC150202
B1024A10 FPC 157609 PLN RiceGAAS
26   AC136009 OSJNBa0025K21 FPC 146539 PLN

RiceGAAS

27   AC136377 OSJNBa0028G07 FPC 157463 PLN

RiceGAAS

28   AC137759 OSJNBb0008H02 FPC 143438 PLN

RiceGAAS

29   AC136150 OSJNBa0023F12 FPC 147801 PLN

RiceGAAS

30 70.3 cM AC136491 OSJNBa0062E06 E3588S 158842 PLN

RiceGAAS

31 71.4 cM

AC133710

OSJNBa0002A19 E60570 139052 PLN

RiceGAAS

32 74.6 cM AC137694 OSJNBa0002B02 C567 147896 PLN

RiceGAAS

33 74.9 cM AC124150 OSJNBb0001I22 RG2, E51178 162413 PLN

RiceGAAS

34   AC150702 B1356E08 FPC 136853 PLN

RiceGAAS

35   AC134926 OSJNBb0056I10 FPC 158833 PLN

RiceGAAS

36 77.4 cM AC135568 OSJNBa0078F08 E11749 165440 PLN

RiceGAAS

37   AC134256 OSJNBa0033H01 FPC 178233 PLN

RiceGAAS

38 78.8 cM

AC133248

OSJNBa0080I08 E11382SB 197156 PLN

RiceGAAS

39   AC134925 OSJNBa0041J17 FPC 148829 PLN

RiceGAAS

40 79.1 cM AC136481 OSJNBa0007D07 S4002S 133930 PLN

RiceGAAS

41   AC151106 OSJNOa0281D22   35282 PLN RiceGAAS
      GAP (~0.8cM)        
42   AC151105 OSJNOa0010H20   35359 PLN RiceGAAS
43 79.9 cM

AC108223

OSJNBa0019A16 R3341 175425 PLN

RiceGAAS

44 80.2 cM

AC108224

OSJNBa0038F07 C1127 175703 PLN

RiceGAAS

45   AC134053 OSJNBb0005H02  FPC 144882 PLN

RiceGAAS

46   AC119678 OSJNBa0005H23 FPC 32949 PLN

RiceGAAS

47   AC151599 OSJNBb0018H03   93081 PLN RiceGAAS
48   AC128706 OSJNBa0063F24 FPC 152738 PLN

RiceGAAS

49  

AC134624

OSJNBa0041I05 FPC 148785 PLN

RiceGAAS

50   AC150698 OSJNBa0072P10 FPC 147540 PLN

RiceGAAS

51   AC137753 OSJNBb0084M23 FPC 134180 PLN

RiceGAAS

52 83.0 cM AC136956 OSJNBa0038B22 RG103 177557 PLN

RiceGAAS

53   AC136905 OSJNBb0064E13 FPC 150223 PLN

RiceGAAS

54   AC120889 OSJNBa0018K14 FPC 152725 PLN

RiceGAAS

55 84.6 cM AC133291 P0542B04 E61360S 182823 PLN

RiceGAAS

56   AC109644 P0459F09 E61360S 143533 PLN

RiceGAAS

57   AC137693 OJ1111_B01 FPC 136068 PLN

RiceGAAS

58 85.7 cM AC136149 OSJNBa0060B06 FPC 162568 PLN

RiceGAAS

59   AC108871 OSJNBb0077M24 FPC 128920 PLN

RiceGAAS

60   AC109929 OSJNBa0093J03 FPC 200626 PLN

RiceGAAS

61   AC133218 P0549G05 V78 149473 PLN

RiceGAAS

62   AC137589 OSJNBa0072L08 FPC 152272 PLN

RiceGAAS

63   AC137588 OSJNBa0060K21 FPC 153973 PLN

RiceGAAS

64   AC104847 P0480H08 S723 156301 PLN

RiceGAAS

65   AC136148 OSJNBa0029K08 FPC 136687 PLN

RiceGAAS

66   AC146334 B1356F10 FPC 170681 PLN RiceGAAS
67   AC146765 B1008D06_A01 FPC 3323 PLN  
68   AC137744 OSJNBa0074L11 S10928, E4336 180703 PLN

RiceGAAS

69   AC144700 OSJNBa0017H17 FPC 156331 PLN

RiceGAAS

70 90.6 cM AC114828 OSJNBb0038L23 FPC 124582 PLN

RiceGAAS

71   AC136842 OSJNBa0085C16 FPC 156069 PLN

RiceGAAS

72   AC118347 OSJNBa0043E10 FPC 124591 PLN

RiceGAAS

73 90.6 cM AC109365 OSJNBa0034P08 C6 173088 PLN

RiceGAAS

74 91.4 cM AC109594 OSJNBa0007P22 C6, G4001 148068 PLN

RiceGAAS

75   AC121328 OSJNBb0030E22 FPC 135468 PLN

RiceGAAS

76 97.3 cM AC120884 OSJNBa0017D19 FPC 145856 PLN

RiceGAAS

77   AC120984 OSJNBb0026G02 R1690 123472 PLN

RiceGAAS

78   AC120887 OSJNBa0088K21 FPC 153239 PLN

RiceGAAS

79   AC120886 OSJNBa0068E24 FPC 141492 PLN

RiceGAAS

80   AC120885 OSJNBa0042J05  FPC 150295 PLN

RiceGAAS

81   AC104844 OSJNBb0030L19 FPC 128848 PLN

RiceGAAS

82   AF161269 OSJNBa0034K24 RG353 142852 PLN

RiceGAAS

83   AC104845 OSJNBb0091E08  FPC 119526 PLN

RiceGAAS

84   AC146766 B1112E06 FPC 177488 PLN RiceGAAS
85   AC144716 OSJNBb0108D09 FPC 127371 PLN RiceGAAS
86 99.2 cM AC109832 P0038B07 G1465 149697 PLN

RiceGAAS

87 99.2 cM AC121327 OSJNBa0016O23 FPC 149400 PLN

RiceGAAS

88   AC125780 OSJNBa0030I15 FPC 150206 PLN

RiceGAAS

89 101.9 cM AC118346 OSJNBa0039F06 FPC 133022 PLN

RiceGAAS

90   AC125782 OSJNBa0095P22 FPC 165626 PLN

RiceGAAS

91   AC145349 OSJNBa0096I10 FPC 171946 PLN

RiceGAAS

92   AC104846 P0004C07 G376 135425 PLN

RiceGAAS

93   AC113249 OSJNBa0041L19 FPC 155086 PLN

RiceGAAS

94   AC122143 OSJNBa0090F16 FPC 147341 PLN

RiceGAAS

95   AC125781 OSJNBa0058G18 FPC 175397 PLN

RiceGAAS

96 104.9 cM AC137751 OSJNBa0014E11 L833 199348 PLN

RiceGAAS

97 104.9 cM AC108872 OSJNBb0079P23 FPC 125090 PLN

RiceGAAS

98   AC145775 P0313E01 FPC 149215 PLN RiceGAAS
99 106.8 cM AC129224 OSJNBa0029P13 L468 158506 PLN

RiceGAAS

100 106.8 cM AC120888 P0485F09 C82 161276 PLN

RiceGAAS

101 109.3 cM AC108870 P0682E05 C950 162223 PLN

RiceGAAS

102   AC146592 OSJNBa0010P23_PCR FPC 19234 PLN RiceGAAS
103   AC125783 OSJNBb0039K08 FPC  122163 PLN

RiceGAAS

104   AC126057 OSJNBb0026D16 FPC 129166 PLN

RiceGAAS

105   AC129227 OSJNBb0099J16 FPC 133198 PLN

RiceGAAS

106 112.4 cM AC129226 OSJNBb0024E08 Y2668 131946 PLN

RiceGAAS

107 112.9 cM AC133609 OSJNBa0002C14 L1044 154029 PLN

RiceGAAS

108   AC134924 OSJNBb0076M06 FPC  133581 PLN

RiceGAAS

109   AC134922 OSJNBa0004D06 FPC 157547 PLN

RiceGAAS

110   AC146582 OSJNBa0042P06_E10 FPC 1708 PLN  
111   AC135643 OSJNBa0023F01 FPC 145009 PLN

RiceGAAS

112   AC134923 OSJNBb0030I07 FPC  122733 PLN

RiceGAAS

113   AC136998 OSJNBa0082P17 FPC  157539 PLN

RiceGAAS

114   AC135190 OSJNBa0064H09 FPC 146742 PLN

RiceGAAS

115   AC135644 OSJNBa0085H07 FPC 133291 PLN

RiceGAAS

116   AC144734

OSJNBa0026O24_C01

FPC 2105 PLN  
117   AC133216 OSJNBb0049B20 FPC 131337 PLN

RiceGAAS

118   AC145395 OSJNBa0047M04 R1506 110861 PLN RiceGAAS

Additional clones submitted :

119
10.0-17.0 cM
AC133217 OSJNBa0052H02# Sequence overlap 159632 PLN

RiceGAAS

120 10.0-17.0 cM AC126056 OSJNBa0031P23# Sequence overlap 147624 phase II

RiceGAAS

121 ~57.6 cM AC123535 OSJNBb0082J12 FPC 81502 phase II

RiceGAAS

122   AC109645 P0410D09 FPC 43883 PLN RiceGAAS
123 ~77.4 cM AC136925 OSJNBa0090B19 FPC 113164 phase II

RiceGAAS

124 ~85.7 cM AC104848 P0704G09 FPC 160922 phase II

RiceGAAS

125 ~106.8 cM AC129225 OSJNBa0051D10 FPC 140272 PLN RiceGAAS
126 chr03 AC137758 OSJNBa0060B05#   94344 phase II RiceGAAS
127 chr09 AC129339 OSJNBb0115K12# FPC 128788 phase II

RiceGAAS

128 AC135189

OSJNBa0010F04#

FPC 144898 phase II

RiceGAAS

129 AC131246 OSJNBa0016J08# FPC 133253 phase II

RiceGAAS

130 101.9 cM  AC138608

Pseudomolecule 101.9

  348970 phase II RiceGAAS

# These clones were found not to fall in the region assigned to India / to overlap with clones given above.

 
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